This course describes the benefits of using the DRAGEN Platform for secondary analysis of sequencing data, provides an introduction to the technology, and lists available pipelines.
Recorded Webinar (September 2019) | llumina Technical Support invites you to learn about BaseSpace, Illumina’s cloud-based sequencing data analysis solution. In this presentation, we will discuss how to navigate the BaseSpace dashboard, general BaseSpace functionally, and tips and tricks for successful application and workflow utilization. We will cover the following topics: How to upload/view data in BaseSpace, discussion of major analysis workflows, general overview of how to analyze data on BaseSpace.
Please note: BaseMount and BaseSpace CLI are alpha software releases; features and functionality may change over time, and support is directly through Illumina software development.
This course provides an overview of the DRAGEN analysis pipelines. By the end of this course, you will be able to identify the role of the DRAGEN Platform in secondary data analysis, list the available pipelines, and briefly describe the expected performance and accuracy.
This course provides an overview of the DRAGEN server installation process, lists the resources needed for the self-installation, and describes placement, security, and network considerations.
Recorded Webinar (November 2019) | The Illumina DRAGEN (Dynamic Read Analysis for GENomics) Bio-IT Platform utilizes Field-Programmable Gate Array (FPGA) hardware in combination with efficiently written software to provide highly-accurate analysis of next-generation sequencing (NGS) data in a fraction of the time required with traditional CPU-based methods. The DRAGEN platform is a cost-efficient analysis solution that is easily scalable between analyzing small and very large sequencing data sets. This webinar is intended for users of DRAGENon-site servers with working knowledge of the Linux command line. In this webinar, we will discuss the following topics: Building reference hash tables and the various advanced options available; Recommended best practices for data input and output withDRAGEN on-site servers; Description of different types of variant calling available for the Germline pipeline, and; Demonstration of Germline variant calling with advanced options.
Recorded Webinar (February 2020) | The DRAGEN team is excited to announce the release of DRAGEN version 3.5. This version includes accuracy improvements for the Somatic, SV and RNA pipelines as compared to the previous version, further acceleration to the RNA pipeline, support for CNV analysis on Somatic samples, V8 version of the Mapper that improves the mapping rate, new workflow for large scale cohort calling as compared to the traditional combine GVCF operation, and support for accelerated random and non-random UMI read collapsing. The webinar is intended for all users of DRAGEN. These features will be made available for on-site customers and also Cloud users on various platforms like BaseSpace and AWS Marketplace.